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CellCognition

CellCognition is a free open-source computational framework for quantitative analysis of high-throughput fluorescence microscopy ( time-lapse) images in the field of bioimage informatics and systems microscopy. The CellCognition framework uses image processing, computer vision and machine learning techniques for single-cell tracking and classification of cell morphologies. This enables measurements of temporal progression of cell phases, modeling of cellular dynamics and generation of phenotype map.